get_cosine_similarity: get_cosine_similarity()
In priesgo/TCGAome: MultiOmics (just RNAseq and RPPA...) Data Analyzer on TCGA data

Description Usage Arguments Value Examples

Function that gets the cosine functional similarity between two terms. That is a measure of the shared terms in the annotations resources.

1	get_cosine_similarity(x, term1, term2)

`x`	The GeneAnnotations class on which the method will run.
`term1`	The first term on which to calculate the functional similarity.
`term2`	The second term on which to calculate the functional similarity.

The cosine functional similarity between term1 and term2

kegg <- TCGAome::load_kegg()
random_kegg_term1 = kegg@term2gene$Term[runif(1, max = length(kegg@term2gene$Term))]
random_kegg_term2 = kegg@term2gene$Term[runif(1, max = length(kegg@term2gene$Term))]
get_cosine_similarity(kegg, random_kegg_term1, random_kegg_term2)