Description Arguments Examples
compute which fragments carry modification
psm |
data.frame |
modification |
data.frame |
1 2 3 4 5 6 7 8 9 10 11 | library(bibliospec)
rm(list=ls())
dbfile <- file.path(path.package("bibliospec"),
"extdata/peptideStd.sqlite")
# call constructor
BS <- Bibliospec(dbfile=dbfile)
tmp <- BS$getAnnotationLists()
ann <- Annotate()
ann$isModification(tmp$psml[[1]], tmp$modl[[1]])
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