dot-fixGT: .fixGT

Description Usage Arguments

Description

Switches the genotype to adjust for the reverse complement switch (0/0 -> 1/1)

Usage

1
.fixGT(vcf.gt, affy.gt, ret.idx = FALSE)

Arguments

vcf.gt

VCF genotype (0,1,2)

affy.gt

Affy6 genotype

ret.idx

Returns the index of matching instead of genotype fix


quevedor2/CCLid documentation built on July 15, 2020, 4:05 a.m.