Overlaps probesets and orders based on chr position
| 1 | .overlapProbeset(ref.ids, comp.ids, snp6.dat)
 | 
| ref.ids | Reference probeset IDs to match order to | 
| comp.ids | IDs of the given input, comparator | 
| snp6.dat | SNP6 probeset genomic position, accessible from CCLid::ccl_table | 
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