fullpull: fullpull
In quevedor2/CCLid: Compares Cancer Cell Line Genotypes Against Pharmacogenomic Datasets
Description
Usage
Arguments
Value
Description
Gets the synonymous cell lines and cell line that they derived from,
as well as any indication of MSI or probelmatic cell line (e.g. contamination)
Usage
1
fullpull(cvcl, melt.cells)
Arguments
cvcl
Cellosaurus CVCL id (e.g. CVCL_1384)
melt.cells
Melted cellosaurus dataframe, accessible from CCLid::ccl_table
Value
Dataframe of all synonymous (SS), similar origins (OI), MSI positive, or problematic
lines associated with the CVCL
quevedor2/CCLid documentation built on July 15, 2020, 4:05 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Gets the synonymous cell lines and cell line that they derived from, as well as any indication of MSI or probelmatic cell line (e.g. contamination)
Usage
1 | fullpull(cvcl, melt.cells)
|
Arguments
cvcl |
Cellosaurus CVCL id (e.g. CVCL_1384) |
melt.cells |
Melted cellosaurus dataframe, accessible from CCLid::ccl_table |
Value
Dataframe of all synonymous (SS), similar origins (OI), MSI positive, or problematic lines associated with the CVCL
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.