find_mbr_int: Find the MBR intensity

In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data

Find the MBR intensity

Description

Find the MBR intensity

Usage

find_mbr_int(
  ys,
  ts,
  ss,
  mbr_ret,
  mbr_y,
  mbr_ret_tol = 25,
  max_mbr_fold = 20L,
  n_dia_scans = 6L,
  min_y = 2e+06
)

Arguments

ys	A vector of intensity values.
ts	A vector of time values.
ss	A vector of scan numbers.
mbr_ret	The reference MBR retention time.
mbr_y	The reference MBR intensity.
mbr_ret_tol	The tolerance in MBR retention time in seconds.
max_mbr_fold	The maximum absolute fold change in MBR.
n_dia_scans	The maximum number of zero-intensity scans for gap filling in peak tracing. Not adjustable by users but synchronized with mzion.
min_y	The cut-off of intensity values in MBR. Change to a smaller value with PASEF.

qzhang503/proteoQ documentation built on Dec. 14, 2024, 12:27 p.m.