hpeptideMBR: Helper of peptideMBR
In qzhang503/proteoQ: Processing and Informatic Analysis of Mass Spectrometrirc Data
hpeptideMBR R Documentation
Helper of peptideMBR
Description
Helper of peptideMBR
Usage
hpeptideMBR(
ms1files,
filelist,
dat_dir,
path_ms1,
mbr_ret_tol = 25,
max_mbr_fold = 20,
step = 1e-05,
min_y = 2e+06
)
Arguments
ms1files
The names of MS1 data files.
filelist
The name of peptide files.
dat_dir
The working directory.
path_ms1
The path to MS1 data files.
mbr_ret_tol
The tolerance in MBR retention time in seconds.
max_mbr_fold
The maximum absolute fold change in MBR.
step
The mass error in ppm / 1e6.
min_y
The cut-off of intensity values in MBR. See also
htraceXY. Need to change to a smaller value with PASEF.
qzhang503/proteoQ documentation built on Dec. 14, 2024, 12:27 p.m.
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| hpeptideMBR | R Documentation |
Helper of peptideMBR
Description
Helper of peptideMBR
Usage
hpeptideMBR(
ms1files,
filelist,
dat_dir,
path_ms1,
mbr_ret_tol = 25,
max_mbr_fold = 20,
step = 1e-05,
min_y = 2e+06
)
Arguments
ms1files |
The names of MS1 data files. |
filelist |
The name of peptide files. |
dat_dir |
The working directory. |
path_ms1 |
The path to MS1 data files. |
mbr_ret_tol |
The tolerance in MBR retention time in seconds. |
max_mbr_fold |
The maximum absolute fold change in MBR. |
step |
The mass error in |
min_y |
The cut-off of intensity values in MBR. See also htraceXY. Need to change to a smaller value with PASEF. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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