findAACodon: find genomic coordinates of amino acid position in a protein...
In raim/segmenTools: Tools for Functional Genome Exploration
findAACodon R Documentation
find genomic coordinates of amino acid position in a protein on genome
TODO: this does not account for introns
Description
TODO: to solve this generally, the amino acid sequence of the protein
must be blasted against the genome
Usage
findAACodon(start, aa, strand)
Arguments
start
start position of the ATG start codon
aa
position of the amino acid in the protein
strand
coding strand
raim/segmenTools documentation built on March 20, 2024, 6:23 a.m.
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| findAACodon | R Documentation |
find genomic coordinates of amino acid position in a protein on genome TODO: this does not account for introns
Description
TODO: to solve this generally, the amino acid sequence of the protein must be blasted against the genome
Usage
findAACodon(start, aa, strand)
Arguments
start |
start position of the ATG start codon |
aa |
position of the amino acid in the protein |
strand |
coding strand |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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