build_hmm_annots: A helper function to build chromHMM annotations for hg19 from...
In rcavalcante/annotatr: Annotation of Genomic Regions to Genomic Annotations
View source: R/build_annotations.R
build_hmm_annots R Documentation
A helper function to build chromHMM annotations for hg19 from UCSC Genome Browser.
Description
A helper function to build chromHMM annotations for hg19 from UCSC Genome Browser.
Usage
build_hmm_annots(
genome = c("hg19"),
annotations = annotatr::builtin_annotations()
)
Arguments
genome
The genome assembly.
annotations
A character vector of valid chromatin state annotatin codes.
Value
A GRanges object.
rcavalcante/annotatr documentation built on Aug. 22, 2024, 7:33 a.m.
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View source: R/build_annotations.R
| build_hmm_annots | R Documentation |
A helper function to build chromHMM annotations for hg19 from UCSC Genome Browser.
Description
A helper function to build chromHMM annotations for hg19 from UCSC Genome Browser.
Usage
build_hmm_annots(
genome = c("hg19"),
annotations = annotatr::builtin_annotations()
)
Arguments
genome |
The genome assembly. |
annotations |
A character vector of valid chromatin state annotatin codes. |
Value
A GRanges object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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