matchDiseases: MATCH diseases of PhysicalEntity/Reaction/Pathway

In reactome/ReactomeGraph4R: Interface for the Reactome Graph Database

MATCH diseases of PhysicalEntity/Reaction/Pathway

Description

To find Diseases related to a PhysicalEntity or an Event, or get PhysicalEntities/Events associated with a Disease in reverse

Usage

matchDiseases(
  id = NULL,
  displayName = NULL,
  species = NULL,
  type = c("row", "graph")
)

Arguments

id	stId or dbId of a PhysicalEntity/Event/Disease
displayName	displayName of a PhysicalEntity/Event/Disease
species	name or taxon id or dbId or abbreviation of aspecies
type	return results as a list of dataframes ('row'), or as a graph object ('graph')

Value

Disease(s) related to the given PhysicalEntity/Reaction/Pathway; or instances related to the given Disease

See Also

Other match: matchHierarchy(), matchInteractors(), matchObject(), matchPEroles(), matchPaperObjects(), matchPrecedingAndFollowingEvents(), matchReactionsInPathway(), matchReferrals()

Examples

disease <- "neuropathy"
# matchDiseases(displayName=disease, species="M. musculus", type="row")
# matchDiseases(id="R-HSA-162588", type="graph")

reactome/ReactomeGraph4R documentation built on May 15, 2023, 8:45 p.m.