cell.gating: Cell gating
In rezakj/iCellR: Analyzing High-Throughput Single Cell Sequencing Data
cell.gating R Documentation
Cell gating
Description
This function takes an object of class iCellR and a 2D tSNE or UMAP plot and gates around cells to get their ids.
Usage
cell.gating(x = NULL, my.plot = NULL, plot.type = "tsne")
Arguments
x
An object of class iCellR.
my.plot
The plot to use for gating. Must be a 2D plot.
plot.type
Choose from knetl, umap and tsne, default = NULL.
Value
An object of class iCellR.
rezakj/iCellR documentation built on March 29, 2024, 6:55 p.m.
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| cell.gating | R Documentation |
Cell gating
Description
This function takes an object of class iCellR and a 2D tSNE or UMAP plot and gates around cells to get their ids.
Usage
cell.gating(x = NULL, my.plot = NULL, plot.type = "tsne")
Arguments
x |
An object of class iCellR. |
my.plot |
The plot to use for gating. Must be a 2D plot. |
plot.type |
Choose from knetl, umap and tsne, default = NULL. |
Value
An object of class iCellR.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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