clust.cond.info: Calculate cluster and conditions frequencies

In rezakj/iCellR: Analyzing High-Throughput Single Cell Sequencing Data

Calculate cluster and conditions frequencies

Description

This function takes an object of class iCellR and calculates cluster and conditions frequencies.

Usage

clust.cond.info(
  x = NULL,
  plot.type = "pie",
  my.out.put = "data",
  normalize.ncell = TRUE,
  normalize.by = "percentage"
)

Arguments

x	An object of class iCellR.
plot.type	Choose from pie/pie.cond or bar/bar.cond, defult = pie.
my.out.put	Chose from "data" or "plot", default = "data".
normalize.ncell	If TRUE the values will be normalized to the number of cells by downsampling.
normalize.by	Chose from "sf" (size factor) or "percentage", default = "percentage".

Value

An object of class iCellR.

rezakj/iCellR documentation built on March 29, 2024, 6:55 p.m.