getNumFlankingBases: getNumFlankingBases (internal function)
In rmpiro/decompTumor2Sig: Decomposition of individual tumors into mutational signatures by signature refitting
View source: R/external_classes_wrapper_functions.R
getNumFlankingBases R Documentation
getNumFlankingBases (internal function)
Description
'getNumFlankingBases()' extracts the content of the flankingBasesNum
slot (numeric value) from a pmsignature::MutationFeatureData or
from a pmsignature::EstimatedParameters object.
Usage
getNumFlankingBases(x)
Arguments
x
Object from which to get the slot data.
Value
Slot data.
Author(s)
Rosario M. Piro
Politecnico di Milano
Maintainer: Rosario
M. Piro
E-Mail: <rmpiro@gmail.com> or <rosariomichael.piro@polimi.it>
References
http://rmpiro.net/decompTumor2Sig/
Krueger, Piro (2019) decompTumor2Sig: Identification of mutational
signatures active in individual tumors. BMC Bioinformatics
20(Suppl 4):152.
rmpiro/decompTumor2Sig documentation built on May 15, 2022, 3:27 a.m.
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View source: R/external_classes_wrapper_functions.R
| getNumFlankingBases | R Documentation |
getNumFlankingBases (internal function)
Description
'getNumFlankingBases()' extracts the content of the flankingBasesNum
slot (numeric value) from a pmsignature::MutationFeatureData or
from a pmsignature::EstimatedParameters object.
Usage
getNumFlankingBases(x)
Arguments
x |
Object from which to get the slot data. |
Value
Slot data.
Author(s)
Rosario M. Piro
Politecnico di Milano
Maintainer: Rosario
M. Piro
E-Mail: <rmpiro@gmail.com> or <rosariomichael.piro@polimi.it>
References
http://rmpiro.net/decompTumor2Sig/
Krueger, Piro (2019) decompTumor2Sig: Identification of mutational
signatures active in individual tumors. BMC Bioinformatics
20(Suppl 4):152.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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