API for robjohnnoble/demonanalysis
Analysis and plotting of demon data
| Global functions | |
|---|---|
| T_grow_j | Man page Source code |
| add_columns | Man page Source code |
| add_relative_time | Man page Source code |
| adjust_mig_rate | Man page Source code |
| all_output | Man page Source code |
| all_statuses | Man page Source code |
| ancestry | Man page Source code |
| apply_combinations | Man page Source code |
| apply_combinations_parallel | Man page Source code |
| combine_dfs | Man page Source code |
| corCI_high | Man page Source code |
| corCI_low | Man page Source code |
| cor_pval | Man page Source code |
| cor_summary | Man page |
| count_drivers | Man page Source code |
| count_parameters | Man page Source code |
| count_seeds | Man page Source code |
| create_plots_batch | Man page Source code |
| data | Man page |
| depth_wait_cor_summary | Man page |
| disp_rate | Man page Source code |
| disp_rate_demon | Man page Source code |
| disp_rate_fission | Man page Source code |
| disp_rate_max | Man page Source code |
| disp_rate_min | Man page Source code |
| dominant | Man page Source code |
| driver_geno_div_df_batch | Man page Source code |
| driver_matrix | Man page |
| driver_phylo | Man page |
| filter_by_generation_or_numcells | Man page Source code |
| final_error_message | Man page Source code |
| final_generation | Man page Source code |
| find_correlations | Man page Source code |
| first_inc_moment | Man page Source code |
| geno_dist | Man page Source code |
| get_Variable_cor_summary | Man page Source code |
| get_Variable_cor_summary_FinalSize | Man page Source code |
| get_cor_summary | Man page Source code |
| get_summary | Man page Source code |
| get_tree_from_matrix | Man page Source code |
| get_wait_cor_summary | Man page Source code |
| grid_plot | Man page Source code |
| hist2 | Man page Source code |
| image_df_from_grid_file | Man page Source code |
| inv_Simpson_index | Man page Source code |
| lambda | Man page Source code |
| lambda_invasion | Man page Source code |
| make_dir | Man page Source code |
| make_image_file_name | Man page Source code |
| metrics | Man page Source code |
| mig_rate | Man page Source code |
| muller_df_from_file | Man page Source code |
| output | Man page |
| output_allele_counts | Man page |
| output_driver_allele_counts | Man page |
| output_driver_genotype_counts | Man page |
| output_genotype_counts | Man page |
| output_passengersgrid | Man page |
| parameter_names_and_values | Man page Source code |
| parameters | Man page |
| plot_R2_verus_sweep_metric | Man page Source code |
| plot_all_charts | Man page Source code |
| plot_all_images | Man page Source code |
| plot_allelecount_vs_origintime | Man page |
| plot_corr_outcome_versus_period | Man page Source code |
| plot_corr_waiting_time_versus_depth | Man page Source code |
| plot_corr_waiting_time_versus_start_size | Man page Source code |
| plot_counts | Man page Source code |
| plot_cum_dist | Man page Source code |
| plot_curves_faceted | Man page Source code |
| plot_driver_geno_div | Man page Source code |
| plot_figure2 | Man page Source code |
| plot_first_inc_moment | Man page Source code |
| plot_logit_freq_dist | Man page Source code |
| plot_mutation_waves | Man page |
| plot_scatter_outcome_diversity | Man page Source code |
| plot_scatter_waiting_time_diversity | Man page Source code |
| plot_trajectories_by_K | Man page Source code |
| plot_trajectories_by_diversity | Man page Source code |
| plot_tree | Man page Source code |
| plot_viol_sweep_metric | Man page Source code |
| prob_successful_migration | Man page Source code |
| quadratic_diversity | Man page Source code |
| read_delim_special | Man page Source code |
| reflect_on_diagonal | Man page Source code |
| refresh_data_files | Man page Source code |
| rho | Man page Source code |
| sum_df | Man page |
| summary | Man page |
| sweep_sequence | Man page Source code |
| sweep_times | Man page Source code |
| time_expected | Man page Source code |
| time_fixation | Man page Source code |
| time_migration | Man page Source code |
| trans_rate | Man page Source code |
| wait_cor_summary | Man page |
