reverseChromosomes: Reverse the order of the specified chromosomes
In rohan-shah/mpMap2: Genetic Analysis of Multi-Parent Recombinant Inbred Lines

Description Usage Arguments Details Value Examples

Create a new object, with the specified chromosomes reversed

1	reverseChromosomes(mpcrossMapped, chromosomes)

`mpcrossMapped`	The initial object, for which we want to reverse some of the chromosomes
`chromosomes`	The names of the chromosomes to reverse

Create a new object, with the specified chromosomes reversed

An object of class mpcrossMapped, with certain chromosomes reversed.

map <- qtl::sim.map()
pedigree <- f2Pedigree(1000)
cross <- simulateMPCross(map = map, pedigree = pedigree, mapFunction = haldane, seed = 1)
mappedCross <- mpcrossMapped(cross = cross, map = map)
reversedX <- reverseChromosomes(mappedCross, "X")
reversedX@map[["X"]]
mappedCross@map[["X"]]