API for rz6/DIADEM
Normalization avoiding modelling and detection of differential interactions in Hi-C data via GLM.

Global functions
%>% Man page
HiCcomparator Man page
HiCglm Man page
IMR90-MboI-1_40kb-raw_maps Man page
MSC-HindIII-1_40kb-raw_maps Man page
MSC-HindIII-1_40kb-raw_tads Man page
artificial_lri Man page
balance Man page
best_fit_bilinear Man page
bootstrap_dataset Man page
bootstrap_interactions Man page
bootstrap_sparse Man page
compartment_ranges Man page
constructGLM Man page
crosses Man page
decay_correlation.HiCcomparator Man page
dense2sparse Man page
differential_interactions.HiCglm Man page
do_pca Man page
dominating_signal.HiCcomparator Man page
hicdiff.HiCglm Man page
hicdiff2mtx Man page
image_plot_na Man page
interactions2tads Man page
interactions2zscores Man page
intersect_tads Man page
left.max Man page
local.max Man page
local.min Man page
map2tads Man page
mean_expected Man page
merge.HiCcomparator Man page
move_contacts Man page
pc2mtx Man page
plotHiCglm Man page
plot_contact_map Man page
plot_diff_map Man page
plot_pc_vector Man page
plot_regions Man page
plot_with_inset Man page
proportions Man page
read_dense Man page
read_npz Man page
read_size Man page
remove_unmappable Man page
restore_unmappable_mtx Man page
restore_unmappable_vec Man page
right.min Man page
sample_hic_maps Man page
sample_tads Man page
save_npz Man page
significance Man page
sparse2dense Man page
sparse2interactions Man page
superdiag Man page
rz6/DIADEM documentation built on May 8, 2019, 12:54 a.m.