restore_unmappable_vec: Restores deleted regions (cells) in vector, for example...

In rz6/DIADEM: Hi-C differential analysis via dependency modelling of chromatin interactions with generalized linear models

Description

Restores deleted regions (cells) in vector, for example unmappable regions in pc vector.

Usage

restore_unmappable_vec(vec, idx, empty.elem = NA)

Arguments

vec	numeric vector
idx	indices of elements in initial vector (before cells removal) - the one which is to be restored
empty.elem	numeric or NA how to fill missing (restored) cells

Examples

# create vector with zeros
v <- c(1,2,3,0,0,0,2,2,0,9,8,0)
# get indices of 0 elements
idx <- which(v == 0)
v.without <- v[-idx]
restore_unmappable_vec(v.without, idx)
restore_unmappable_vec(v.without, idx, empty.elem = 0)

rz6/DIADEM documentation built on Dec. 31, 2019, 3:51 a.m.