coverageBySNP: Sample coverage rates by SNP thresholds
In sa-lee/moimix: Estimating mulitplicity of infection from high-throughput sequencing data
Description
Usage
Arguments
Value
View source: R/seqarray_process_coverage.R
Description
Compute the proportion of SNPs within each sample that are covered
to at least threshold.
Usage
1
coverageBySNP(coverage_list, threshold)
Arguments
coverage_list
an alleleCounts object
threshold
coverage threshold
Value
a vector of n.samples length
sa-lee/moimix documentation built on April 23, 2020, 10:32 a.m.
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Description Usage Arguments Value
View source: R/seqarray_process_coverage.R
Description
Compute the proportion of SNPs within each sample that are covered to at least threshold.
Usage
1 | coverageBySNP(coverage_list, threshold)
|
Arguments
coverage_list |
an |
threshold |
coverage threshold |
Value
a vector of n.samples length
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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