API for sa-lee/moimix
Estimating mulitplicity of infection from high-throughput sequencing data

Global functions
alleleCounts	Man page Source code
bafMatrix	Man page Source code
barcodes	Man page Source code
binommix	Man page Source code
binommixCDF	Man page Source code
binommixPDF	Source code
callMajor	Man page Source code
ciMM	Man page Source code
collapseProbs	Source code
coverageBySNP	Man page Source code
coverageBySample	Man page Source code
dtbeta	Man page Source code
dtexp	Man page Source code
extractBarcode	Man page Source code
extractPED	Man page Source code
gambian_isolates	Man page
generateWindows	Man page Source code
getBarcodeVariants	Man page Source code
getCoordinates	Man page Source code
getDosage	Man page Source code
getFws	Man page Source code
getGATKInfo	Man page Source code
getHeterozygosity	Man page Source code
getHeterozygosityBySample	Man page Source code
getMAF	Man page Source code
getMSE	Man page Source code
getTheta	Man page Source code
infomat	Man page Source code
lltexp	Man page Source code
maf_summary	Man page
mleTexp	Man page Source code
moimix	Man page
mse	Man page Source code
perSiteAlleleCoverage	Man page Source code
perSiteCoverage	Man page Source code
perSiteCoverageBySNP	Man page Source code
perSiteCoverageBySample	Man page Source code
perplexity	Source code
plot.bafMatrix	Man page Source code
processGATK	Source code
processVarscan	Source code
ptbeta	Man page Source code
qtbeta	Man page Source code
readEstMOI	Man page Source code
rtbeta	Man page Source code
rtexp	Man page Source code
sampleMM	Man page Source code
scaledProportion	Man page Source code
seMM	Man page Source code
simulateMOI	Man page Source code
toProb	Source code

sa-lee/moimix documentation built on April 23, 2020, 10:32 a.m.

Note that we can't provide technical support on individual packages. You should contact the package authors for that.