perSiteCoverageBySample: Compute the proportion of samples covered up any number of...
In sa-lee/moimix: Estimating mulitplicity of infection from high-throughput sequencing data
Description
Usage
Arguments
Value
View source: R/seqarray_process_helpers.R
Description
Compute the proportion of samples covered up any number of bases
Usage
1
perSiteCoverageBySample(gdsfile, threshold)
Arguments
gdsfile
a SeqVarGDSClass object
threshold
integer lower bound for coverage
Value
a vector of length equal to number of variants with
the proportion of samples covered up to threshold
sa-lee/moimix documentation built on April 23, 2020, 10:32 a.m.
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Description Usage Arguments Value
View source: R/seqarray_process_helpers.R
Description
Compute the proportion of samples covered up any number of bases
Usage
1 | perSiteCoverageBySample(gdsfile, threshold)
|
Arguments
gdsfile |
a |
threshold |
integer lower bound for coverage |
Value
a vector of length equal to number of variants with the proportion of samples covered up to threshold
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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