writeMIDAS: Write a CNOlist structure into a MIDAS file

In saezlab/CellNOptR: Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data

Write a CNOlist structure into a MIDAS file

Description

This function takes a CNOlist structure (output of makeCNOlist and readMIDAS) and save it a MIDAS format.

Usage

writeMIDAS(CNOlist, filename,  timeIndices=NULL, overwrite=FALSE)

Arguments

CNOlist	a CNOlist structure
filename	a filename. Not overwritten if it exists already
timeIndices	select subset of the times to be saved. Works with indices (not time values)
overwrite	overwrite the file if it exists already (Default is FALSE)

Author(s)

T. Cokelaer

See Also

makeCNOlist, readMIDAS, CNOlist-class

Examples

   
   data(CNOlistToy)
   writeMIDAS(CNOlistToy, 'test.csv')
   readMIDAS('test.csv')
   writeMIDAS(CNOlistToy, 'test.csv', timeIndices=c(1,2), overwrite=TRUE)

saezlab/CellNOptR documentation built on April 16, 2024, 5:21 a.m.