extract_sets: Extract sets
In saezlab/decoupleR: decoupleR: Ensemble of computational methods to infer biological activities from omics data
View source: R/utils-dataset-converters.R
extract_sets R Documentation
Extract sets
Description
Extracts feature sets from a renamed network (see rename_net).
Usage
extract_sets(network)
Arguments
network
Tibble or dataframe with edges and it's associated metadata.
Examples
inputs_dir <- system.file("testdata", "inputs", package = "decoupleR")
mat <- readRDS(file.path(inputs_dir, "mat.rds"))
net <- readRDS(file.path(inputs_dir, "net.rds"))
net <- rename_net(net, source, target, mor)
extract_sets(net)
saezlab/decoupleR documentation built on Oct. 21, 2024, 8:47 a.m.
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View source: R/utils-dataset-converters.R
| extract_sets | R Documentation |
Extract sets
Description
Extracts feature sets from a renamed network (see rename_net).
Usage
extract_sets(network)
Arguments
network |
Tibble or dataframe with edges and it's associated metadata. |
Examples
inputs_dir <- system.file("testdata", "inputs", package = "decoupleR")
mat <- readRDS(file.path(inputs_dir, "mat.rds"))
net <- readRDS(file.path(inputs_dir, "net.rds"))
net <- rename_net(net, source, target, mor)
extract_sets(net)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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