get_ksn_omnipath: OmniPath kinase-substrate network
In saezlab/decoupleR: decoupleR: Ensemble of computational methods to infer biological activities from omics data
get_ksn_omnipath R Documentation
OmniPath kinase-substrate network
Description
Retrieve a ready to use, curated kinase-substrate Network from the OmniPath
database.
Usage
get_ksn_omnipath(...)
Arguments
...
Passed to OmnipathR::import_omnipath_enzsub.
Details
Import enzyme-PTM network from OmniPath, then filter out anything that is not
phospho or dephosphorilation. Then format the columns for use with decoupleR
functions.
saezlab/decoupleR documentation built on Oct. 21, 2024, 8:47 a.m.
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| get_ksn_omnipath | R Documentation |
OmniPath kinase-substrate network
Description
Retrieve a ready to use, curated kinase-substrate Network from the OmniPath database.
Usage
get_ksn_omnipath(...)
Arguments
... |
Passed to |
Details
Import enzyme-PTM network from OmniPath, then filter out anything that is not phospho or dephosphorilation. Then format the columns for use with decoupleR functions.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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