Files in sahirbhatnagar/sail
Sparse Additive Interaction Learning

.Rbuildignore
.gitignore
.travis.yml
CODE_OF_CONDUCT.md
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md R/cv.sail.R R/data.R R/kkt.R R/ksfilter.R R/lspath_strong.R R/lspath_weak.R R/methods.R R/plot.R R/sail.R R/simulations.R R/utils.R README.md
_pkgdown.yml
codecov.yml
data-raw/OASIS_data.R data-raw/SIMULATED_data.R
data-raw/oasis_cross-sectional.csv
data-raw/oasis_hippocampus.csv
data-raw/oasis_longitudinal.csv
data-raw/oasis_longitudinal_hippocampus.csv
data/oasis.rda
data/sailsim.rda
docs/CODE_OF_CONDUCT.html
docs/LICENSE-text.html
docs/articles/index.html
docs/articles/introduction-to-sail.html
docs/articles/introduction-to-sail_files/figure-html/unnamed-chunk-12-1.png
docs/articles/introduction-to-sail_files/figure-html/unnamed-chunk-13-1.png
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docs/articles/user-defined-design.html
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docs/authors.html
docs/docsearch.json
docs/index.html
docs/jquery.sticky-kit.min.js
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Q_theta.html
docs/reference/createfolds.html
docs/reference/cv.lspath.html
docs/reference/cv.sail-1.png
docs/reference/cv.sail-2.png
docs/reference/cv.sail.html
docs/reference/design_sail.html
docs/reference/figures/nonlinear-motivation.png
docs/reference/gendata.html
docs/reference/gendataPaper.html
docs/reference/index.html
docs/reference/oasis.html
docs/reference/plot.cv.sail-1.png
docs/reference/plot.cv.sail.html
docs/reference/plot.sail-1.png
docs/reference/plot.sail.html
docs/reference/plotInter-1.png
docs/reference/plotInter-2.png
docs/reference/plotInter.html
docs/reference/plotMain-1.png
docs/reference/plotMain-2.png
docs/reference/plotMain.html
docs/reference/predict.cv.sail.html
docs/reference/predict.sail.html
docs/reference/print.sail.html
docs/reference/sail-1.png
docs/reference/sail-2.png
docs/reference/sail-3.png
docs/reference/sail-internal.html
docs/reference/sail.html
docs/reference/sailsim.html
docs/reference/standardize.html
docs/sitemap.xml
figure/alpha.pdf figure/gendata2_cvfit.pdf figure/gendata2_fit.pdf figure/plot-data-1.pdf man/Q_theta.Rd man/createfolds.Rd man/cv.lspath.Rd man/cv.sail.Rd man/design_sail.Rd
man/figures/nonlinear-motivation.png
man/gendata.Rd man/gendataPaper.Rd man/oasis.Rd man/plot.cv.sail.Rd man/plot.sail.Rd man/plotInter.Rd man/plotMain.Rd man/predict.cv.sail.Rd man/predict.sail.Rd man/print.sail.Rd man/sail-internal.Rd man/sail.Rd man/sailsim.Rd man/standardize.Rd manuscript/bin/ADNI.R manuscript/bin/intro.R manuscript/bin/setup.R manuscript/bin/simulation.R
manuscript/source/GEbib.bib
manuscript/source/cache/__packages
manuscript/source/cache/globals_69c8b31c76c8410b53b6b1485d33930e.RData
manuscript/source/cache/globals_69c8b31c76c8410b53b6b1485d33930e.rdb
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manuscript/source/cache/packages_faf179da204d4bb0aeed60754ecea160.RData
manuscript/source/cache/packages_faf179da204d4bb0aeed60754ecea160.rdb
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manuscript/source/cache/showdata_7c94adbc4dee080524c3e983094d6c1f.RData
manuscript/source/cache/showdata_7c94adbc4dee080524c3e983094d6c1f.rdb
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manuscript/source/cache/toy-solution-path_9a2b1a560a010b5fe51d073232f929b3.RData
manuscript/source/cache/toy-solution-path_9a2b1a560a010b5fe51d073232f929b3.rdb
manuscript/source/cache/toy-solution-path_9a2b1a560a010b5fe51d073232f929b3.rdx
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manuscript/source/cache/unnamed-chunk-1_c81224b032db30fdc6aab198b421fc65.rdb
manuscript/source/cache/unnamed-chunk-1_c81224b032db30fdc6aab198b421fc65.rdx
manuscript/source/figure/error-crosses-adni-1.pdf manuscript/source/figure/plot-fpr-sim-1.pdf manuscript/source/figure/plot-inter-adni-1.pdf manuscript/source/figure/plot-main-adni-1.pdf manuscript/source/figure/plot-mse-nactive-sim-1.pdf manuscript/source/figure/plot-mse-sim-1.pdf manuscript/source/figure/plot-nactive-sim-1.pdf manuscript/source/figure/plot-tpr-fpr-sim-1.pdf manuscript/source/figure/plot-tpr-sim-1.pdf manuscript/source/figure/simulation-results-1.pdf manuscript/source/figure/toy-effects-1.pdf manuscript/source/figure/toy-solution-path-1.pdf
manuscript/source/sail_manuscript_v1.Rnw
manuscript/source/sail_manuscript_v1.pdf
manuscript/source/sail_manuscript_v1.tex
my_sims/README.md my_sims/eval_functions.R my_sims/figures/sail_inter25_X3_paramIndex1_200sims.pdf my_sims/figures/sail_inter25_X4_paramIndex1_200sims.pdf my_sims/figures/sail_inter50_X3_paramIndex1_200sims.pdf my_sims/figures/sail_inter50_X4_paramIndex1_200sims.pdf my_sims/figures/sail_inter75_X3_paramIndex1_200sims.pdf my_sims/figures/sail_inter75_X4_paramIndex1_200sims.pdf my_sims/figures/sail_intertruth_X3_paramIndex1_200sims.pdf my_sims/figures/sail_intertruth_X4_paramIndex1_200sims.pdf my_sims/figures/sail_main_eff_paramIndex1_200sims.pdf my_sims/figures/upset_selection_sail_paramIndex1-2-2.pdf my_sims/figures/upset_selection_sail_paramIndex1.pdf my_sims/main.R
my_sims/mcgill-simulations.sh
my_sims/mcgill_simulations.R my_sims/mcgill_simulations_analysis.R my_sims/mcgill_simulations_gendata.R my_sims/mcgill_simulations_gendata_cvfit.R my_sims/mcgill_simulations_gendata_glint_lassoBT.R my_sims/mcgill_simulations_lasso.R my_sims/method_functions.R my_sims/method_functions_rda.R my_sims/model_functions.R my_sims/nonlinear_motivation_plot.R my_sims/plot_functions_rda_ADNI.R
my_sims/rda_results/rda_ADNI_may_17_2018v2.rds
my_sims/rda_results/rda_ADNI_may_17_2018v2_data.rds
my_sims/simulation_results/apr_25_2018_results.rds
my_sims/simulation_results/may_15_2018_results.rds
my_sims/testing_sail.R my_sims/writeup.Rmd
rda/covariates.csv
rda/csf_amyloid_final.csv
rda/functions-old.R rda/rda_ADNI.R rda/rda_ADNI_figures.R rda/rda_ADNI_v2.R rda/rda_NIHPD.R rda/rda_NIHPD_data_cleaning.R rda/rda_OASIS.R rda/rda_ashley.R rda/rda_deldup.R rda/rda_econ.R rda/rda_mlbench.R rda/rda_scott.R rda/rds_Credit.R
rda/scott/For Sahir.xlsx
rda/scott/cvfit_alpha03_groupedFalse_strongFalse_nfolds5_bs3_Estd2_pop_100m.rds
rda/scott/interaction_distance_density.pdf rda/scott/maineff_distance_to_aiport.pdf rda/scott/maineff_traffic_counts.pdf
rda/scott/scott.rds
rda/scott/scott_raw.rds
rda/scrap_funshim.R
sail.Rproj
tests/figs/cv-plot/cv-sail-cv-curve.svg
tests/figs/deps.txt
tests/figs/effect-plot/interaction-persp-plot.svg
tests/figs/effect-plot/main-effect-curve.svg
tests/figs/solution-path-plot/sail-solution-path-weak.svg
tests/figs/solution-path-plot/sail-solution-path.svg
tests/testthat.R tests/testthat/test-cv.sail.R tests/testthat/test-gendata.R tests/testthat/test-plots.R tests/testthat/test-sail.R
vignettes/.gitignore
vignettes/introduction-to-sail.Rmd vignettes/user-defined-design.Rmd
sahirbhatnagar/sail documentation built on May 26, 2018, 3:17 p.m.