Files in scfurl/m3addon

This package adds to the popular "monocle3"

R/H5AD.R R/RcppExports.R R/backspin.R R/batchCorrect.R R/cca.R R/clustering.R R/density_peak.R R/doubletFinder.R R/doubletdetection.R R/package.R R/plotting.R R/preprocess_cds.R R/project_data.R R/pseudobulking.R R/publication_plotting.R R/read_tenx.R R/reduce_dimensions.R R/scanpy.R R/scores.R R/scrublet.R R/select_genes.R R/similarity.R R/soupX.R R/spring.R R/trimap.R R/utils.R README.md debug.R debug.Rmd man/GMT_to_list.Rd man/add_meta_data_cds.Rd man/backspin.Rd man/calcKNNgraph_euclidean.Rd man/calcKNNgraph_pearson.Rd man/calculate_gene_dispersion.Rd man/check_input.Rd man/cluster_LSI.Rd man/cluster_PCA.Rd man/common_features.Rd man/density_peak.Rd man/detect_genes.Rd man/doubletFinder_v3.Rd man/doubletdetection.Rd man/enrichmentPlot.Rd man/estimate_corrected_score.Rd man/estimate_score.Rd man/extract_data.Rd man/get_assay.Rd man/groupSums.Rd man/import_scanpy_h5.Rd man/iterative_LSI.Rd man/loadSoupX.Rd man/load_STARsolo_data.Rd man/load_cellranger_data_h5.Rd man/m3addon-package.Rd man/m3addon.Rd man/mnnCorrect_cds.Rd man/plot_cells_m3addon.Rd man/plot_genes_violin.Rd man/plot_geneset.Rd man/plot_grouped_geneset.Rd man/plot_heatmap.Rd man/plot_pseudotime_heatmap.Rd man/plot_rho_delta.Rd man/preprocess_cds.Rd man/project_data.Rd man/pseudobulk.Rd man/red_dim_plot.Rd man/reduce_dimension.Rd man/remove_duplicated_rows.Rd man/safe_subset.Rd man/scrublet_R.Rd man/segment.Rd man/select_genes.Rd man/sfc.Rd man/spRing.Rd man/sparseRowVariances.Rd man/split_plot.Rd man/ssgsea.Rd man/tf_idf_transform.Rd man/tf_idf_transform_v2.Rd man/trimap.Rd