reportConsistentPeak: reportConsistentPeak
In scottzijiezhang/m6Amonster: Analyze m6A seq data
View source: R/reportConsistentPeak.R
Usage
1
2
reportConsistentPeak(readsOut, samplenames, joint_threshold = NULL,
threads = 1)
Arguments
readsOut
The data list contain peak calling result
samplenames
The samplenames to be reported for consistent peaks
joint_threshold
Define the number of sample required to have consistent peak in a locus to call consistent peak in a group.
This option is useful only when joint poeak has not been reported by jointPeakCount().
Value
merged.report The joint peak of merged bins.
scottzijiezhang/m6Amonster documentation built on Jan. 8, 2021, 1:37 p.m.
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View source: R/reportConsistentPeak.R
Usage
1 2 | reportConsistentPeak(readsOut, samplenames, joint_threshold = NULL,
threads = 1)
|
Arguments
readsOut |
The data list contain peak calling result |
samplenames |
The samplenames to be reported for consistent peaks |
joint_threshold |
Define the number of sample required to have consistent peak in a locus to call consistent peak in a group. This option is useful only when joint poeak has not been reported by jointPeakCount(). |
Value
merged.report The joint peak of merged bins.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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