CNPBayes: Bayesian mixture models for copy number estimation

In scristia/CNPBayes: Bayesian mixture models for copy number polymorphisms

Description

The CNPBayes package provides functions median_summary, kolmogorov_batches, and down_sample2 for summarizing genomic data at a specific region of the genome for thousands of samples and identifying latent batch effects. Functions MultiBatch, posteriorSimulation, and genotype_model can be used to fit a finite hierarchical mixture of t-distributions across the identified batches and genotype the estimated mixture components.

scristia/CNPBayes documentation built on Aug. 9, 2020, 7:31 p.m.