McmcParams: Create an object of class 'McmcParams' to specify iterations,...

In scristia/CNPBayes: Bayesian mixture models for copy number polymorphisms

Description

Create an object of class 'McmcParams' to specify iterations, burnin, etc.

Usage

McmcParams(
  iter = 1000L,
  burnin = 0L,
  thin = 1L,
  nStarts = 1L,
  param_updates = .param_updates(),
  min_GR = 1.2,
  min_effsize = round(1/3 * iter, 0),
  max_burnin = 32000,
  min_chains = 1
)

Arguments

iter	number of iterations
burnin	number of burnin iterations
thin	thinning interval
nStarts	number of chains to run
param_updates	labeled vector specifying whether each parameter is to be updated (1) or not (0).
min_GR	not in use
min_effsize	not in use
max_burnin	not in use
min_chains	not in use

Value

An object of class 'McmcParams'

Examples

     mp <- McmcParams(iter=100, burnin=10)

scristia/CNPBayes documentation built on Aug. 9, 2020, 7:31 p.m.