API for shaliulab/idocr
Analyze traces created in the Individual Drosophila Optogenetics Conditioner (IDOC)
| Global functions | |
|---|---|
| add_empty_roi | Man page |
| add_facet | Source code |
| add_significance_marks | Man page |
| add_trend_geom | Source code |
| analyse_dataset | Man page Source code |
| annotate_cross | Man page Source code |
| annotate_cross_all | Man page |
| annotate_facet | Man page Source code |
| average_trial | Source code |
| base_plot | Man page Source code |
| best_trial | Source code |
| beta_walk | Source code |
| build_filename | Man page Source code |
| center_dataset | Man page Source code |
| check_api_version | Man page Source code |
| combine_inputs | Man page Source code |
| combined_trial | Source code |
| compute_preference_index | Man page Source code |
| construct_animal_id | Man page Source code |
| cross_detector | Man page Source code |
| define_rectangle | Man page |
| define_rectangle_all | Man page Source code |
| document_analysis | Source code |
| document_annotated_data | Source code |
| document_border | Source code |
| document_controller_data | Source code |
| document_cross_data | Source code |
| document_data | Source code |
| document_dataset | Source code |
| document_delay | Source code |
| document_experiment_folder | Source code |
| document_gg | Source code |
| document_limits | Source code |
| document_plot | Man page Source code |
| document_result_folder | Source code |
| document_script | Man page Source code |
| document_shape_data | Source code |
| document_stimulus | Source code |
| document_suffix | Source code |
| document_tracker_data | Source code |
| document_treatments | Source code |
| empty_canvas | Source code |
| eucl_dist | Source code |
| export_dataset | Man page Source code |
| export_pi_summary | Man page Source code |
| export_summary | Man page Source code |
| export_summary_new | Man page Source code |
| find_exits | Man page Source code |
| find_exits_all | Man page |
| find_file | Man page Source code |
| find_pi_file | Source code |
| find_rois | Man page Source code |
| format_summary | Source code |
| format_text | Man page Source code |
| fwrite_ | Man page |
| generate_toy_dataset | Man page |
| get_event_data | Man page Source code |
| get_extra_columns | Man page |
| get_metadata | Man page |
| get_paired_plot_theme | Source code |
| get_roi_center | Man page Source code |
| get_sleep_plot_theme | Source code |
| get_summary_plot_theme | Source code |
| get_traces_plot_theme | Source code |
| global_mask | Man page |
| idocr | Man page Source code |
| idocr_time | Man page |
| interpolate_controller | Man page |
| keep_needed_columns_only | Source code |
| learning_plot | Source code |
| link_idoc_metadata | Man page Source code |
| load_controller | Man page Source code |
| load_dataset | Man page Source code |
| load_idoc_data | Source code |
| load_metadata | Man page Source code |
| load_rois | Man page Source code |
| load_sessions_v1 | Source code |
| load_sessions_v2 | Source code |
| load_systematic_rois | Man page |
| load_varmap | Man page Source code |
| main | Source code |
| make_annotation_df | Source code |
| make_outputs | Man page Source code |
| make_summary | Man page Source code |
| mark_analysis_mask | Man page Source code |
| mark_crosses | Man page |
| mark_decision_zone | Man page |
| mark_space | Man page Source code |
| mark_stimuli | Man page Source code |
| mark_time | Man page Source code |
| melt_idoc_data | Man page |
| multiple_testing_correction | Source code |
| pad_t0 | Man page Source code |
| paired_plot | Man page Source code |
| paired_t_test | Source code |
| paired_wilcoxon_test | Source code |
| parse_side | Man page Source code |
| pipeline | Man page Source code |
| plot_dataset | Man page Source code |
| preference_index | Man page Source code |
| preprocess_controller | Man page Source code |
| preprocess_dataset | Man page Source code |
| preprocess_tracker | Man page Source code |
| process_folder | Man page |
| pvalue2stars | Source code |
| random_walk | Source code |
| read_config | Source code |
| read_idoc_metadata | Source code |
| read_pi | Man page Source code |
| read_pi_multitrial | Source code |
| read_roi | Man page Source code |
| rebound | Man page Source code |
| remove_duplicates | Man page Source code |
| remove_empty_roi | Man page |
| reshape_controller | Man page Source code |
| save_paired_plot | Source code |
| save_plot | Man page |
| scale_rectangle | Man page |
| seconds_mask | Man page Source code |
| sort_facet_levels | Man page Source code |
| toy_controller | Man page Source code |
| toy_dataset | Man page |
| toy_roi | Man page Source code |
| toy_roi_all | Man page Source code |
| unpaired_t_test | Source code |
| unpaired_wilcoxon_test | Source code |
| update_scores_with_manual_annotation | Man page Source code |
| validate_controller_file | Source code |
| validate_events | Man page |
| validate_inputs | Man page Source code |
| validate_number_of_fields | Man page |
| validate_varmap_file | Man page Source code |
| walk | Man page Source code |
| walk_x | Source code |
| wrap_quotes | Source code |
| write_dataset | Man page |
