pvalueScatter: P-Value Scatter Plot

Description Usage Arguments

View source: R/plots.R

Description

P-Value Scatter Plot

Usage

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pvalueScatter(formula, data, pval.th = 0.05, pval.th.y = pval.th,
  pval.th.x = pval.th, label.th = Inf)

Arguments

formula

Formula of the form yvar ~ xvar that specify which variable in data contains variables for the x-axis and y-axis respectively.

data

a data.frame object containing the data to plot

pval.th

default p-value threshold used to filter te data shown in the plot. Only data with p <= pval.th are used.

pval.th.y, pval.th.x

p-value threshold to use for the variable in the x-axis and y-axis respectively

label.th

-log10(p-value) threshold above which data points are labelled. Only the points in the lower triangle are labelled.


shenorrLab/bseqsc documentation built on May 26, 2017, 8:06 a.m.