LR2TF: get score of Triple relation corresponding specific...

In shouguog/cellcallEXT: inference of intercellular networks from single-cell transcriptomics

Description

get score of Triple relation corresponding specific cellA-cellB

get score of Triple relation corresponding specific cellA-cellB

Usage

LR2TF(
  object,
  sender_cell,
  recevier_cell,
  slot = "expr_l_r_log2_scale",
  org = "Homo sapiens",
  IS_core = TRUE
)

LR2TF(
  object,
  sender_cell,
  recevier_cell,
  slot = "expr_l_r_log2_scale",
  org = "Homo sapiens",
  IS_core = TRUE
)

Arguments

object	a Cellwave objects
sender_cell	the cell type of sender cell
recevier_cell	the cell type of recevier cell
slot	plot the graph with the data of specific slot
org	choose the species source of gene, eg "Homo sapiens", "Mus musculus"
IS_core	logical variable ,whether use reference LR data or include extended datasets

shouguog/cellcallEXT documentation built on Jan. 2, 2022, 8:13 p.m.