counts2normalized_10X: transform count to CPM
In shouguog/cellcallEXT: inference of intercellular networks from single-cell transcriptomics
Description
Usage
Arguments
Value
View source: R/codeAllCaseControl_v1.5.R
Description
transform count to CPM
Usage
1
counts2normalized_10X(data, toType, scale.factor = 10^6)
Arguments
data
a dataframe with row of gene and column of sample
toType
whether RPKM or TPM of result you wanted, eg "CPM"
scale.factor
set the scale factor, default "10^6"
Value
the CPM of data
shouguog/cellcallEXT documentation built on Jan. 2, 2022, 8:13 p.m.
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Description Usage Arguments Value
View source: R/codeAllCaseControl_v1.5.R
Description
transform count to CPM
Usage
1 | counts2normalized_10X(data, toType, scale.factor = 10^6)
|
Arguments
data |
a dataframe with row of gene and column of sample |
toType |
whether RPKM or TPM of result you wanted, eg "CPM" |
scale.factor |
set the scale factor, default "10^6" |
Value
the CPM of data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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