mylog2foldChange.diy.casecontrol: calculate foldchange between case and control for each...
In shouguog/cellcallEXT: inference of intercellular networks from single-cell transcriptomics
Description
Usage
Arguments
Value
View source: R/codeAllCaseControl_v1.5.R
Description
calculate foldchange between case and control for each celltype
Usage
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mylog2foldChange.diy.casecontrol(
inData,
cell.type,
method = "median",
probs = 0.75,
status = NULL
)
Arguments
inData
a dataframe of gene expression
cell.type
the cell type which you want to calculate the foldchange
method
default is "median",eg "median" or "mean"
probs
the quantile for median calculate
Value
the foldchange value of each celltype in cellwave object
shouguog/cellcallEXT documentation built on Jan. 2, 2022, 8:13 p.m.
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Description Usage Arguments Value
View source: R/codeAllCaseControl_v1.5.R
Description
calculate foldchange between case and control for each celltype
Usage
1 2 3 4 5 6 7 | mylog2foldChange.diy.casecontrol(
inData,
cell.type,
method = "median",
probs = 0.75,
status = NULL
)
|
Arguments
inData |
a dataframe of gene expression |
cell.type |
the cell type which you want to calculate the foldchange |
method |
default is "median",eg "median" or "mean" |
probs |
the quantile for median calculate |
Value
the foldchange value of each celltype in cellwave object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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