exome_mutCatRaw_df: Example mutational catalog for the exome vignette

Description Usage Value References Examples

Description

exome_mutCatRaw_df: A data frame in the format of a SNV mutation catalog. The mutational catalog contains SNV variants from a cohort of small-cell lung cancer published by Rudin et al. (Nature Genetics 2012) which was later used in the de novo discovery analysis of mutational signatures in human cancer by Alexandrov et al. (Nature 2013).

Usage

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data(smallCellLungCancerMutCat_NatureGenetics2012)

Value

A data fame in the layout of a SNV mutational catalog

References

https://www.nature.com/articles/ng.2405

Examples

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data(smallCellLungCancerMutCat_NatureGenetics2012)
head(exome_mutCatRaw_df)
dim(exome_mutCatRaw_df)

slw287r/yapsa documentation built on June 7, 2020, 12:46 a.m.