View source: R/cumulativeDuprateBarplot.R
cumulativeDuprateBarplot | R Documentation |
cumulativeDuprateBarplot
Barplot showing the cumulative read counts
fraction
cumulativeDuprateBarplot(DupMat, stepSize = 0.05, ...)
DupMat |
The duplication matrix calculated by |
stepSize |
The size of the windows used for plotting |
... |
Other params sent to barplot |
This function makes a barplot showing the cumulative read counts fraction
from the duplication matrix calculated by analyzeDuprates
.
nothing
# dm is a duplication matrix calculated by analyzeDuprates:
# R> dm <- analyzeDuprates(bamDuprm,gtf,stranded,paired,threads)
attach(dupRadar_examples)
# call the plot
cumulativeDuprateBarplot(DupMat=dm)
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