stanleycai123/PRISM: Cell-to-cell variation in chromatin accessibility

Calculates cell-to-cell variation in chromatin accessibility at a set of DNA sequences (unified by some common characteristic, like TF binding). Uses angular cosine distance inputted into principal coordinate analysis. Then calculates each cell's distance frmo the centroid in full principal coordinate space.

Getting started

Package details

Maintainer
LicenseGPL 3
Version0.0.0.9000
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("stanleycai123/PRISM")
stanleycai123/PRISM documentation built on Dec. 6, 2017, 12:25 a.m.