Description Usage Arguments Examples
Selects background peaks to control for technical biases associated with GC content and mean accessibility. Background peaks are drawn from non-TF bound peaks and matched peak-for-peak for GC content, and matrix-for-matrix for mean accessibility.
1 | get_background_peaks(scATACseq_experiment, ChIPseq_experiment)
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scATACseq_experiment |
A SummarizedExperiment with scATACseq data. |
ChIPseq_experiment |
A ChIPseq matrix. |
1 |
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