Man pages for stanleycai123/PRISM
Cell-to-cell variation in chromatin accessibility
| add_gcbias | Calculate GC content of every DNA sequence |
| bedgraphs_to_accessibility_matrix | Bedgraph files to accessibility matrix |
| bedgraphs_to_summarized_experiment | Bedgraph files to SummarizedExperiment |
| calculate_variation | Calculate cell-to-cell variation in chromatin accessibility |
| centroid_distance | Distance from Centroid in Principal Coordinate Space using... |
| cosine_distance | Angular cosine distance |
| get_background_peaks | Background peak selection |
| matrix_to_summarized_experiment | Creates a Summarized Experiment from an accessibility matrix |
| raw_variation | Calculate unnormalized cell-to-cell variation in chromatin... |
