cleanUpGroup-methods: description of function cleanUpGroup

In stela2502/BioData: The package allows to annotate a numeric data.table with col and row data

Description

Clean up intermixed groups

Usage

cleanUpGroup(x, group, otherGroup, max_cells = 10, min_cells = 10, ...)

Arguments

x	the BioData object
group	the samples column to clean up
otherGroup	the samples column to look for contaminations
max_cells	how many cells to max use to create the predictive RF object (default = 10 [cells])
min_cells	if two groups inside one cluster exceed min_cells one more cell group is created (defualt =1% of all cells)
...	additional variables for the randomForest call

stela2502/BioData documentation built on Feb. 23, 2022, 5:47 a.m.