prep_output_gtf: Creation of GTF based on CYCLeR results
In stiv1n/CYCLeR: CircRNA transcriptome assembly tool
View source: R/cycler_fuctions.R
prep_output_gtf R Documentation
Creation of GTF based on CYCLeR results
Description
Creation of GTF based on CYCLeR results
Usage
prep_output_gtf(qics_out, sgfc, annot_list = NULL)
Arguments
sgfc
SummarizedExperiment object with info on the circular splice graph features
annot_list
ORG package; soon to be expanded
qics
CYCLeR data.frame of intermediate results
Details
This function takes the
Value
GTF-like table
Author(s)
Stefan Stefanov
stiv1n/CYCLeR documentation built on Sept. 15, 2022, 4:39 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/cycler_fuctions.R
| prep_output_gtf | R Documentation |
Creation of GTF based on CYCLeR results
Description
Creation of GTF based on CYCLeR results
Usage
prep_output_gtf(qics_out, sgfc, annot_list = NULL)
Arguments
sgfc |
|
annot_list |
ORG package; soon to be expanded |
qics |
CYCLeR |
Details
This function takes the
Value
GTF-like table
Author(s)
Stefan Stefanov
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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