transcripts_per_sample: Transcript assembly
In stiv1n/CYCLeR: CircRNA transcriptome assembly tool
View source: R/cycler_fuctions.R
transcripts_per_sample R Documentation
Transcript assembly
Description
Transcript assembly per sample
Transcript assembly per sample based on sample name in the “sample_table”
Usage
transcripts_per_sample(sgfc, BSJ_gr, sample_name)
Arguments
sgfc
SummarizedExperiment object with info on the circular splice graph features
BSJ_gr
GRange object of BSJ coordinates
sample_name
name of the sample as indicated in the sample table
Value
data.frame of transcript information in flat format
Author(s)
Stefan Stefanov
stiv1n/CYCLeR documentation built on Sept. 15, 2022, 4:39 p.m.
R Package Documentation
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View source: R/cycler_fuctions.R
| transcripts_per_sample | R Documentation |
Transcript assembly
Description
Transcript assembly per sample Transcript assembly per sample based on sample name in the “sample_table”
Usage
transcripts_per_sample(sgfc, BSJ_gr, sample_name)
Arguments
sgfc |
|
BSJ_gr |
|
sample_name |
name of the sample as indicated in the sample table |
Value
data.frame of transcript information in flat format
Author(s)
Stefan Stefanov
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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