Man pages for susjoh/wildsim
Tools for simulating wild populations for Genome-wide Association Studies.
| createKinshipMatrix | createKinshipMatrix: create a kinship matrix using ibs in R |
| CumuPos | CumuPos: Determine the cumulative positions of... |
| estimateGenomicHeritability | estimateGenomicHeritability: create a kinship matrix using... |
| estimateLD | estimateLD: Estimated LD (r2) between adjacent markers. |
| estimateQTLEffects | estimateQTLEffects: estimate variance attributed to simulated... |
| FullGwasPlot | FullGwasPlot: Create a Manhattan plot from a GenABEL... |
| FullGwasSummary | FullSummary: Create a Manhatten and P-P plots and return top... |
| FullPpPlot | FullPpPlot: Create a P-P plot from a GenABEL... |
| hello | Hello, World! |
| multiplot | multiplot: Multiple plot function. # ggplot objects can be... |
| parseParamFile | parseParamFile: Parse the parameter file. |
| parseQMSim | parseQMSim: Parse files in a QMSIM directory. This function... |
| RunGCTA | RunGCTA: Run GCTA |
| RunPLINK | RunPLINK: Run PLINK |
| RunQMSim | RunQMSim: Run QMSim |
| RunSED | RunSED: Run sed in Windows |
