estimateQTLEffects: estimate variance attributed to simulated QTLs
1 2 | estimateQTLEffects(markerfile, phenofile, gwaa.data = NULL, idvec = NULL,
flanking.window, outfile = NULL, merged = F)
|
markerfile |
string |
phenofile |
string |
gwaa.data |
GenABEL gwaa.data set, optional. If specified, map positions are taken from here. |
idvec |
Vector of IDs to include (all others excluded). Optional |
flanking.window |
integer. Number of SNPs flanking the QTL for estimation of effect sizes |
merged |
Boolean, FALSE. If TRUE, include the quantitative trait nucleotide from the simulation. |
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