PlotIsotopePattern: Plot Isotope Pattern and Isotope Pattern Sequenced

Description Usage Arguments Value Examples

View source: R/PlotIsotopePattern.R

Description

Plot Isotope Pattern and Isotope Pattern Sequenced

Usage

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PlotIsotopePattern(
  MQCombined,
  long_names = FALSE,
  sep_names = NULL,
  position_dodge_width = 1,
  palette = "Set2"
)

Arguments

MQCombined

Object list containing all the files from the MaxQuant output. It is the result from using make_MQCombined.

long_names

If TRUE, samples having long names will be considered, and the name will be split by sep_names. By default = FALSE.

sep_names

If long_names is TRUE, sep_names has to be selected. Samples names will be split. By default is NULL.

position_dodge_width

Position of the columns within each others.

palette

The palette from the Package RColorBrewer. By default is 'Set2'.

Value

Returns a plot Isotope Pattern and Isotope Pattern Sequenced.

Examples

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MQPathCombined <- system.file('extdata/combined/', package = 'MQmetrics')
MQCombined <- make_MQCombined(MQPathCombined)
PlotIsotopePattern(MQCombined)

svalvaro/MQmetrics documentation built on Jan. 14, 2022, 6:36 p.m.