gpatterns.tidy_cpgs_2_pat_freq: Generate CpG pattern frequency from tidy_cpgs
In tanaylab/gpatterns: Single Molecule Methylation Patterns Analysis Suite
gpatterns.tidy_cpgs_2_pat_freq R Documentation
Generate CpG pattern frequency from tidy_cpgs
Description
Generate CpG pattern frequency from tidy_cpgs
Usage
gpatterns.tidy_cpgs_2_pat_freq(calls, pat_length = 2, min_cov = 1, tidy = TRUE)
Arguments
calls
tidy_cpgs
pat_length
length of the pattern, e.g. for pat_lenth == 2 patterns would
be 00,01,10,11
min_cov
minimal coverage
tidy
tidy
tanaylab/gpatterns documentation built on May 15, 2023, 6:23 p.m.
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| gpatterns.tidy_cpgs_2_pat_freq | R Documentation |
Generate CpG pattern frequency from tidy_cpgs
Description
Generate CpG pattern frequency from tidy_cpgs
Usage
gpatterns.tidy_cpgs_2_pat_freq(calls, pat_length = 2, min_cov = 1, tidy = TRUE)
Arguments
calls |
tidy_cpgs |
pat_length |
length of the pattern, e.g. for pat_lenth == 2 patterns would be 00,01,10,11 |
min_cov |
minimal coverage |
tidy |
tidy |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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