gpatterns.track_stats: Get QC statistics for track

In tanaylab/gpatterns: Single Molecule Methylation Patterns Analysis Suite

Get QC statistics for track

Description

Get QC statistics for track

Usage

gpatterns.track_stats(track, ...)

Arguments

track	track name (or mutiple track names)
...	Arguments passed on to gpatterns.get_pipeline_stats tidy_cpgs_stats_dir directory with tidy_cpgs stats files (cannot be used with multiple tracks) uniq_tidy_cpgs_stats_dir directory with filter_dups stats files (cannot be used with multiple tracks) add_mapping_stats add full mapping statistics (singles, discordant etc.) add_insert_length_stats add average insert length

tanaylab/gpatterns documentation built on May 15, 2023, 6:23 p.m.