gpatterns.tracks_to_pat_space: Generate pattern space
In tanaylab/gpatterns: Single Molecule Methylation Patterns Analysis Suite
gpatterns.tracks_to_pat_space R Documentation
Generate pattern space
Description
Generate pattern space
Usage
gpatterns.tracks_to_pat_space(
tracks,
pat_len,
max_span = NULL,
exclude_intervals = NULL,
exclude_cpgs = NULL,
min_cov = 1
)
Arguments
tracks
tracks
pat_len
pattern length
max_span
maximum span to look for CpGs
exclude_intervals
intervals to exclude
exclude_cpgs
CpGs to exclude
min_cov
minimal coverage per CpG
tanaylab/gpatterns documentation built on May 15, 2023, 6:23 p.m.
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| gpatterns.tracks_to_pat_space | R Documentation |
Generate pattern space
Description
Generate pattern space
Usage
gpatterns.tracks_to_pat_space(
tracks,
pat_len,
max_span = NULL,
exclude_intervals = NULL,
exclude_cpgs = NULL,
min_cov = 1
)
Arguments
tracks |
tracks |
pat_len |
pattern length |
max_span |
maximum span to look for CpGs |
exclude_intervals |
intervals to exclude |
exclude_cpgs |
CpGs to exclude |
min_cov |
minimal coverage per CpG |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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