HostGeneOfSJ: HostGeneOfSJ
In tangchao7498/ICAS:
Description
Usage
Arguments
Author(s)
Description
This function for host gene of SJ
Usage
1
2
3
HostGeneOfSJ(sjRanges, gtfFile, NT = 1)
HostGeneIdentify(object, gtfFile, NT = 1)
Arguments
sjRanges
GRanges-class of splice junctions or introns.
gtfFile
The file.path of GTF file when you used in STAR allignment.
NT
The number of cores in multithreaded parallel computing.
object
an ICASDataSet
Author(s)
Tang Chao
tangchao7498/ICAS documentation built on Jan. 28, 2021, 3:56 p.m.
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Description Usage Arguments Author(s)
Description
This function for host gene of SJ
Usage
1 2 3 | HostGeneOfSJ(sjRanges, gtfFile, NT = 1)
HostGeneIdentify(object, gtfFile, NT = 1)
|
Arguments
sjRanges |
GRanges-class of splice junctions or introns. |
gtfFile |
The file.path of GTF file when you used in STAR allignment. |
NT |
The number of cores in multithreaded parallel computing. |
object |
an ICASDataSet |
Author(s)
Tang Chao
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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