clean_bio: Clean bio

In taxonomicallyinformedannotation/tima-r: Taxonomically Informed Metabolite Annotation

Clean bio

Description

This function cleans the results obtained after biological weighting

Usage

clean_bio(
  annot_table_wei_bio = get("annot_table_wei_bio", envir = parent.frame()),
  edges_table = get("edges_table", envir = parent.frame()),
  minimal_consistency = get("minimal_consistency", envir = parent.frame())
)

Arguments

annot_table_wei_bio	Table containing your biologically weighted annotation
edges_table	Table containing the edges between features
minimal_consistency	Minimal consistency score for a class. FLOAT

Value

A table containing the biologically weighted annotation where only a given number of initial candidates are kept

See Also

weight_bio

Examples

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taxonomicallyinformedannotation/tima-r documentation built on Dec. 20, 2024, 9:32 a.m.