diagnosticPlotsValidate: diagnosticPlotsValidate

In tbep-tech/tbepRSparrow: RSPARROW: An R system for SPARROW modeling

Description

Creates diagnostic plots and maps for validation sites output to ~/estimate/(run_id)_validation_plots.pdf, and saves residual maps as shape files.

Executed By: estimate.R
Executes Routines:

• checkBinaryMaps.R

• diagnosticMaps.R

• unPackList.R

Usage

diagnosticPlotsValidate(file.output.list, class.input.list,
  vsitedata.demtarea.class, vsitedata, vsitedata.landuse, estimate.list,
  mapping.input.list, add_vars, batch_mode)

Arguments

vsitedata	sitedata for validation. Calculated by subdata[(subdata$vdepvar > 0), ]
add_vars	additional variables specified by the setting add_vars to be included in prediction, yield, and residuals csv and shape files
batch_mode	yes/no character string indicating whether RSPARROW is being run in batch mode

tbep-tech/tbepRSparrow documentation built on Oct. 9, 2020, 6:24 a.m.